PDBsum entry 4d8t Go to PDB code:  Pore analysis for: 4d8t calculated with MOLE 2.0 PDB id 4d8t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.88 2.00 40.3 -1.74 -0.49 22.1 84 4 4 3 4 1 2 0   2 1.89 2.08 41.7 -1.33 -0.32 21.1 83 6 4 3 7 1 1 0   3 1.21 1.22 49.7 -1.02 -0.31 13.0 85 5 3 5 6 2 1 0  LLP 51 A SO4 401 A 4 1.21 1.21 58.7 -0.91 -0.40 11.9 83 5 4 4 8 2 1 0  LLP 51 B SO4 401 B 5 1.26 1.25 73.0 -1.04 -0.30 9.5 86 6 4 10 7 4 2 0  LLP 51 A SO4 401 A LLP 51 B SO4 401 B 6 1.57 1.72 79.8 -0.65 -0.03 17.5 71 3 8 0 13 5 4 0  BEN 403 B BEN 402 C 7 1.38 1.60 102.9 -1.10 -0.35 15.9 78 5 8 3 12 2 7 0   8 1.34 1.48 113.7 -0.90 -0.14 16.5 74 7 10 4 16 7 2 0  LLP 51 B SO4 401 B BEN 403 B BEN 402 C 9 1.34 1.34 120.1 -0.85 -0.13 16.1 77 7 11 5 17 7 2 0  LLP 51 A SO4 401 A BEN 403 B BEN 402 C 10 1.25 1.25 129.1 -1.33 -0.35 16.8 80 9 8 8 14 4 4 0  LLP 51 B SO4 401 B 11 1.37 1.39 141.9 -1.23 -0.33 16.3 82 9 10 8 16 4 4 0  LLP 51 A SO4 401 A 12 1.23 1.37 58.8 -0.68 -0.36 10.0 82 5 3 4 9 2 2 0  LLP 51 C SO4 401 C 13 1.29 1.29 66.8 -0.32 -0.26 7.7 84 4 4 6 8 2 3 0  LLP 51 D SO4 401 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.