PDBsum entry 4d8c Go to PDB code:  Pore analysis for: 4d8c calculated with MOLE 2.0 PDB id 4d8c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.01 4.39 57.0 -2.10 -0.63 16.9 85 7 4 7 1 3 0 0  BXD 501 A 2 2.51 2.55 67.9 -1.89 -0.51 16.2 84 5 3 6 2 4 0 0  BXD 501 B 3 2.48 2.52 37.0 -1.71 -0.58 8.6 92 1 2 6 0 2 0 0  BXD 401 C 4 1.64 1.64 41.7 -0.66 -0.44 7.1 89 2 2 3 3 2 1 0  BXD 401 C 5 1.63 1.63 48.2 -1.44 -0.72 10.9 92 3 2 6 2 0 1 0  BXD 401 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.