PDBsum entry 4d6t Go to PDB code:  Tunnel analysis for: 4d6t calculated with MOLE 2.0 PDB id 4d6t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.32 17.5 -1.39 -0.01 23.0 71 2 2 0 3 2 0 1   2 1.35 2.05 18.3 -2.23 -0.56 24.8 73 4 3 2 0 2 0 1   3 1.20 1.78 18.8 -0.37 0.25 10.5 66 2 1 0 2 4 0 0   4 1.26 1.26 26.0 -1.20 -0.67 13.3 91 3 1 4 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.