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PDBsum entry 4d3t
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Pore analysis for: 4d3t calculated with  MOLE 2.0
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PDB id
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4d3t
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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0 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.47 |
1.62 |
39.8 |
-2.25 |
-0.41 |
25.3 |
73 |
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7 |
4 |
1 |
1 |
2 |
2 |
0 |
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RFQ 904 A
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2 |
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1.41 |
1.68 |
41.1 |
-1.60 |
-0.15 |
18.8 |
78 |
4 |
2 |
2 |
3 |
2 |
1 |
0 |
HEM 901 A RFQ 904 A GOL 906 A
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3 |
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2.41 |
2.68 |
41.9 |
-1.42 |
0.12 |
21.7 |
69 |
7 |
3 |
2 |
2 |
5 |
1 |
1 |
HEM 901 A RFQ 904 A POL 907 A
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4 |
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1.41 |
1.68 |
47.4 |
-1.36 |
-0.04 |
17.8 |
70 |
6 |
3 |
3 |
2 |
5 |
1 |
1 |
HEM 901 A RFQ 904 A POL 907 A
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5 |
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2.15 |
2.55 |
47.9 |
-1.33 |
0.15 |
23.0 |
80 |
8 |
3 |
4 |
4 |
3 |
0 |
1 |
HEM 901 A RFQ 904 A GOL 906 A POL 907 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program