 |
PDBsum entry 4ckc
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4ckc calculated with MOLE 2.0
|
PDB id
|
|
|
|
4ckc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
20 pores,
coloured by radius |
 |
21 pores,
coloured by radius
|
21 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.82 |
2.16 |
33.9 |
-1.00 |
0.00 |
17.6 |
79 |
 |
4 |
2 |
2 |
3 |
3 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.29 |
3.22 |
36.9 |
-1.55 |
-0.22 |
18.0 |
78 |
4 |
2 |
3 |
1 |
4 |
0 |
0 |
|
 |
3 |
 |
1.44 |
6.18 |
52.6 |
-3.14 |
-0.48 |
37.8 |
79 |
13 |
8 |
4 |
1 |
0 |
2 |
0 |
|
 |
4 |
 |
1.54 |
6.36 |
59.3 |
-2.59 |
-0.40 |
30.7 |
79 |
8 |
4 |
3 |
2 |
3 |
0 |
0 |
|
 |
5 |
 |
1.17 |
2.99 |
63.2 |
-0.05 |
0.24 |
15.7 |
88 |
10 |
3 |
4 |
11 |
3 |
1 |
0 |
|
 |
6 |
 |
1.24 |
1.53 |
66.3 |
-0.82 |
-0.11 |
17.9 |
82 |
13 |
6 |
5 |
9 |
5 |
2 |
0 |
|
 |
7 |
 |
1.26 |
1.41 |
67.9 |
-1.63 |
-0.46 |
21.7 |
85 |
11 |
6 |
4 |
4 |
1 |
1 |
0 |
|
 |
8 |
 |
1.31 |
1.32 |
77.5 |
-1.99 |
-0.64 |
24.8 |
82 |
5 |
11 |
6 |
4 |
4 |
2 |
0 |
|
 |
9 |
 |
1.34 |
1.34 |
79.0 |
-1.33 |
-0.35 |
18.1 |
77 |
8 |
8 |
4 |
6 |
8 |
1 |
0 |
SAH 1845 A
|
 |
10 |
 |
1.26 |
1.52 |
87.9 |
-2.13 |
-0.50 |
27.6 |
83 |
17 |
11 |
5 |
4 |
1 |
1 |
0 |
|
 |
11 |
 |
1.60 |
6.07 |
102.6 |
-1.48 |
-0.23 |
25.8 |
80 |
21 |
10 |
5 |
6 |
3 |
1 |
0 |
|
 |
12 |
 |
1.74 |
2.26 |
103.1 |
-0.99 |
-0.10 |
20.1 |
80 |
12 |
8 |
5 |
8 |
6 |
2 |
0 |
|
 |
13 |
 |
1.16 |
2.62 |
110.1 |
-1.12 |
-0.06 |
20.8 |
85 |
11 |
7 |
5 |
10 |
3 |
2 |
0 |
|
 |
14 |
 |
1.57 |
6.04 |
120.9 |
-2.19 |
-0.40 |
29.2 |
80 |
16 |
13 |
5 |
4 |
3 |
1 |
0 |
|
 |
15 |
 |
1.96 |
2.15 |
122.5 |
-1.08 |
-0.16 |
19.9 |
81 |
14 |
5 |
6 |
7 |
6 |
1 |
0 |
|
 |
16 |
 |
1.23 |
1.51 |
136.1 |
-1.74 |
-0.49 |
20.7 |
86 |
10 |
5 |
8 |
6 |
2 |
2 |
0 |
|
 |
17 |
 |
1.74 |
2.17 |
140.8 |
-1.76 |
-0.33 |
23.2 |
80 |
9 |
8 |
6 |
5 |
6 |
1 |
0 |
|
 |
18 |
 |
1.18 |
2.55 |
171.0 |
-1.72 |
-0.26 |
22.8 |
85 |
22 |
11 |
11 |
13 |
3 |
5 |
0 |
|
 |
19 |
 |
1.91 |
2.84 |
77.9 |
-2.08 |
-0.33 |
31.3 |
84 |
7 |
7 |
1 |
3 |
1 |
0 |
0 |
|
 |
20 |
 |
1.25 |
1.34 |
123.9 |
-1.12 |
-0.05 |
23.1 |
82 |
11 |
7 |
2 |
8 |
1 |
1 |
0 |
|
 |
21 |
 |
1.27 |
1.37 |
173.3 |
-1.36 |
-0.29 |
23.6 |
82 |
10 |
10 |
4 |
7 |
0 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |