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PDBsum entry 4cbb

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Pore analysis for: 4cbb calculated with MOLE 2.0 PDB id
4cbb
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.16 31.2 -1.89 -0.48 28.5 81 5 4 1 4 0 0 0  
2 2.17 3.47 41.3 -1.55 -0.25 26.2 75 7 5 1 2 4 1 0  GOL 1496 D
3 1.35 2.71 43.5 -0.08 0.22 5.8 84 1 1 5 6 5 1 1  DTT 1491 C EDO 1493 C PE4 1494 C GOL 1495 C
4 1.37 2.60 56.7 -0.82 -0.24 13.7 78 1 5 4 7 6 1 1  DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
5 1.41 1.41 75.1 -1.81 -0.60 26.9 77 10 6 3 6 0 0 0  K 1497 E K 1497 F
6 1.16 1.20 78.8 -2.29 -0.54 30.2 87 10 5 2 5 0 0 0  PE4 1493 B K 1501 B
7 1.18 1.16 81.4 -2.05 -0.53 29.0 87 7 6 3 4 0 0 0  PE4 1493 A K 1499 A GOL 1497 B
8 1.35 2.70 82.8 -0.88 -0.23 16.3 83 4 4 5 9 5 0 1  DTT 1491 C EDO 1492 C EDO 1493 C PE4 1494 C GOL
1495 C K 1501 C
9 1.40 1.40 87.4 -2.03 -0.63 28.8 79 11 9 3 7 0 0 0  K 1500 C K 1498 D
10 1.21 1.28 100.4 -2.02 -0.59 28.6 79 14 9 4 7 0 0 0  K 1500 C K 1498 D
11 1.17 1.62 111.3 -2.02 -0.51 30.7 88 8 12 3 6 0 0 0  PE4 1494 D K 1499 D
12 1.38 2.58 114.6 -0.82 -0.26 14.7 83 3 10 7 8 7 0 1  DTT 1491 D EDO 1493 D PE4 1494 D GOL 1495 D K
1499 D
13 1.30 2.59 115.7 -1.19 -0.33 19.3 80 7 12 5 8 7 1 1  DTT 1491 D EDO 1493 D PE4 1494 D GOL 1495 D K
1499 D
14 1.67 2.15 119.2 -2.22 -0.69 27.8 81 12 17 6 4 4 2 0  DTT 1491 E
15 1.43 2.60 123.6 -1.74 -0.41 22.8 79 12 14 7 5 8 1 1  DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
16 1.68 2.08 129.2 -2.19 -0.79 28.0 83 7 18 8 5 2 2 0  DTT 1491 E
17 1.32 2.63 135.3 -1.63 -0.49 21.2 81 8 14 9 6 6 1 1  DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
18 1.19 1.61 189.7 -1.35 -0.27 21.3 85 10 14 9 12 5 1 1  DTT 1491 F EDO 1492 F PE4 1493 F GOL 1494 F K
1498 F PE4 1494 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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