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PDBsum entry 4cbb
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Pore analysis for: 4cbb calculated with MOLE 2.0
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PDB id
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4cbb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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16 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.17 |
1.16 |
31.2 |
-1.89 |
-0.48 |
28.5 |
81 |
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5 |
4 |
1 |
4 |
0 |
0 |
0 |
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2 |
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2.17 |
3.47 |
41.3 |
-1.55 |
-0.25 |
26.2 |
75 |
7 |
5 |
1 |
2 |
4 |
1 |
0 |
GOL 1496 D
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3 |
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1.35 |
2.71 |
43.5 |
-0.08 |
0.22 |
5.8 |
84 |
1 |
1 |
5 |
6 |
5 |
1 |
1 |
DTT 1491 C EDO 1493 C PE4 1494 C GOL 1495 C
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4 |
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1.37 |
2.60 |
56.7 |
-0.82 |
-0.24 |
13.7 |
78 |
1 |
5 |
4 |
7 |
6 |
1 |
1 |
DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
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5 |
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1.41 |
1.41 |
75.1 |
-1.81 |
-0.60 |
26.9 |
77 |
10 |
6 |
3 |
6 |
0 |
0 |
0 |
K 1497 E K 1497 F
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6 |
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1.16 |
1.20 |
78.8 |
-2.29 |
-0.54 |
30.2 |
87 |
10 |
5 |
2 |
5 |
0 |
0 |
0 |
PE4 1493 B K 1501 B
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7 |
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1.18 |
1.16 |
81.4 |
-2.05 |
-0.53 |
29.0 |
87 |
7 |
6 |
3 |
4 |
0 |
0 |
0 |
PE4 1493 A K 1499 A GOL 1497 B
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8 |
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1.35 |
2.70 |
82.8 |
-0.88 |
-0.23 |
16.3 |
83 |
4 |
4 |
5 |
9 |
5 |
0 |
1 |
DTT 1491 C EDO 1492 C EDO 1493 C PE4 1494 C GOL 1495 C K 1501 C
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9 |
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1.40 |
1.40 |
87.4 |
-2.03 |
-0.63 |
28.8 |
79 |
11 |
9 |
3 |
7 |
0 |
0 |
0 |
K 1500 C K 1498 D
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10 |
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1.21 |
1.28 |
100.4 |
-2.02 |
-0.59 |
28.6 |
79 |
14 |
9 |
4 |
7 |
0 |
0 |
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K 1500 C K 1498 D
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11 |
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1.17 |
1.62 |
111.3 |
-2.02 |
-0.51 |
30.7 |
88 |
8 |
12 |
3 |
6 |
0 |
0 |
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PE4 1494 D K 1499 D
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12 |
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1.38 |
2.58 |
114.6 |
-0.82 |
-0.26 |
14.7 |
83 |
3 |
10 |
7 |
8 |
7 |
0 |
1 |
DTT 1491 D EDO 1493 D PE4 1494 D GOL 1495 D K 1499 D
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13 |
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1.30 |
2.59 |
115.7 |
-1.19 |
-0.33 |
19.3 |
80 |
7 |
12 |
5 |
8 |
7 |
1 |
1 |
DTT 1491 D EDO 1493 D PE4 1494 D GOL 1495 D K 1499 D
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14 |
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1.67 |
2.15 |
119.2 |
-2.22 |
-0.69 |
27.8 |
81 |
12 |
17 |
6 |
4 |
4 |
2 |
0 |
DTT 1491 E
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15 |
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1.43 |
2.60 |
123.6 |
-1.74 |
-0.41 |
22.8 |
79 |
12 |
14 |
7 |
5 |
8 |
1 |
1 |
DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
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16 |
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1.68 |
2.08 |
129.2 |
-2.19 |
-0.79 |
28.0 |
83 |
7 |
18 |
8 |
5 |
2 |
2 |
0 |
DTT 1491 E
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17 |
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1.32 |
2.63 |
135.3 |
-1.63 |
-0.49 |
21.2 |
81 |
8 |
14 |
9 |
6 |
6 |
1 |
1 |
DTT 1491 E EDO 1492 E PE4 1493 E GOL 1494 E
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18 |
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1.19 |
1.61 |
189.7 |
-1.35 |
-0.27 |
21.3 |
85 |
10 |
14 |
9 |
12 |
5 |
1 |
1 |
DTT 1491 F EDO 1492 F PE4 1493 F GOL 1494 F K 1498 F PE4 1494 G
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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