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PDBsum entry 4c8h

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4c8h calculated with MOLE 2.0 PDB id
4c8h
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.37 36.7 -1.57 -0.28 18.7 78 3 1 3 2 3 1 0  
2 1.67 1.78 49.2 -2.07 -0.24 21.9 77 6 3 4 2 4 1 0  
3 1.26 2.33 86.2 -1.68 -0.41 24.7 76 3 7 4 5 5 2 0  MSE 726 A MSE 731 A MSE 774 A MSE 778 A
4 1.29 2.32 133.8 -1.26 -0.32 22.9 76 9 9 4 10 5 3 0  MSE 731 A MSE 774 A MSE 778 A
5 1.21 1.22 152.2 -0.98 -0.27 14.1 79 8 8 9 9 6 4 0  MSE 726 B MSE 778 B MSE 821 B
6 1.31 2.24 203.6 -1.72 -0.41 18.8 79 7 10 12 9 9 2 0  MSE 726 A MSE 731 A MSE 778 A
7 1.25 1.34 333.4 -0.97 -0.19 13.9 74 12 11 12 12 17 6 0  MSE 726 B MSE 778 B MSE 821 B MSE 477 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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