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PDBsum entry 4c7o
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Pore analysis for: 4c7o calculated with  MOLE 2.0
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PDB id
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4c7o
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.65 |
1.84 |
26.9 |
-2.07 |
-0.60 |
28.8 |
77 |
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3 |
2 |
0 |
0 |
0 |
0 |
0 |
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A 15 E A 16 E C 17 E G 18 E C 19 E G 26 E U 27 E
G 28 E U 29 E G 30 E
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2 |
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2.94 |
2.94 |
67.9 |
-1.09 |
-0.86 |
11.5 |
75 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
U 3 E G 4 E G 5 E U 6 E U 7 E C 8 E U 9 E C 11 E
C 12 E G 18 E C 19 E C 25 E G 26 E U 27 E G 28 E
C 32 E G 33 E G 34 E G 35 E A 36 E U 37 E G 45 E
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3 |
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1.60 |
1.74 |
71.4 |
-1.64 |
-0.65 |
19.6 |
81 |
6 |
5 |
3 |
4 |
2 |
0 |
0 |
ALF 1001 A MG 1002 A GDP 1003 A G 18 E C 19 E C
25 E G 26 E U 27 E G 28 E
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4 |
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1.77 |
2.63 |
81.7 |
-2.00 |
-0.56 |
23.6 |
81 |
10 |
6 |
5 |
1 |
3 |
1 |
0 |
ALF 1001 C MG 1002 C GDP 1003 C GDP 1003 D GDP
1306 D C 17 E G 18 E C 19 E G 20 E
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5 |
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1.57 |
1.81 |
91.9 |
-1.56 |
-0.63 |
18.4 |
82 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
ALF 1001 A MG 1002 A GDP 1003 A U 3 E G 4 E G 5 E
U 6 E U 7 E C 8 E U 9 E C 11 E C 12 E U 27 E G 28
E C 32 E G 33 E G 34 E G 35 E A 36 E U 37 E G 45 E
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6 |
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1.80 |
2.03 |
107.9 |
-1.44 |
-0.61 |
15.2 |
78 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
ALF 1001 C MG 1002 C GDP 1003 C GDP 1003 D GDP
1306 D U 3 E G 4 E G 5 E U 6 E U 7 E C 8 E C 11 E
C 12 E G 13 E C 14 E A 15 E A 16 E A 23 E G 24 E
C 25 E G 26 E U 27 E U 29 E C 32 E G 33 E G 34 E
G 35 E A 36 E U 37 E G 45 E
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7 |
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1.73 |
1.88 |
139.4 |
-1.56 |
-0.57 |
17.2 |
80 |
10 |
6 |
6 |
5 |
5 |
1 |
0 |
ALF 1001 A MG 1002 A GDP 1003 A ALF 1001 C MG
1002 C GDP 1003 C GDP 1003 D GDP 1306 D C 8 E U 9
E C 12 E G 13 E C 14 E A 15 E A 16 E A 23 E G 24
E C 25 E G 26 E U 27 E G 28 E U 29 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program