 |
PDBsum entry 4c3e
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4c3e calculated with MOLE 2.0
|
PDB id
|
|
|
|
4c3e
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
30 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.79 |
2.79 |
40.0 |
-1.96 |
-0.68 |
24.9 |
84 |
 |
4 |
5 |
2 |
3 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.67 |
2.76 |
49.2 |
-0.63 |
-0.40 |
11.8 |
84 |
4 |
3 |
3 |
5 |
0 |
0 |
0 |
|
 |
3 |
 |
2.65 |
2.69 |
56.7 |
-2.25 |
-0.38 |
32.3 |
81 |
13 |
5 |
2 |
4 |
1 |
0 |
0 |
|
 |
4 |
 |
1.16 |
1.70 |
58.0 |
-2.53 |
-0.52 |
30.8 |
85 |
12 |
6 |
3 |
2 |
1 |
0 |
0 |
|
 |
5 |
 |
1.15 |
1.73 |
58.6 |
-2.31 |
-0.54 |
25.7 |
87 |
10 |
3 |
4 |
1 |
1 |
0 |
0 |
|
 |
6 |
 |
1.22 |
1.29 |
87.3 |
-2.65 |
-0.47 |
32.8 |
81 |
14 |
7 |
5 |
3 |
2 |
1 |
0 |
|
 |
7 |
 |
2.66 |
2.70 |
88.1 |
-2.10 |
-0.44 |
28.3 |
80 |
16 |
6 |
2 |
4 |
1 |
0 |
0 |
|
 |
8 |
 |
2.82 |
2.95 |
95.7 |
-2.32 |
-0.55 |
29.8 |
83 |
17 |
7 |
5 |
5 |
1 |
0 |
0 |
|
 |
9 |
 |
2.85 |
2.94 |
96.1 |
-2.29 |
-0.52 |
30.0 |
82 |
17 |
7 |
4 |
5 |
1 |
0 |
0 |
|
 |
10 |
 |
2.67 |
2.71 |
106.6 |
-2.38 |
-0.44 |
32.9 |
79 |
20 |
11 |
3 |
5 |
2 |
0 |
0 |
|
 |
11 |
 |
2.67 |
2.70 |
106.1 |
-1.99 |
-0.44 |
28.9 |
78 |
20 |
10 |
2 |
6 |
2 |
0 |
0 |
|
 |
12 |
 |
1.26 |
1.29 |
108.0 |
-2.16 |
-0.47 |
26.8 |
80 |
14 |
7 |
6 |
3 |
2 |
1 |
0 |
|
 |
13 |
 |
2.69 |
2.71 |
108.3 |
-1.91 |
-0.45 |
25.7 |
78 |
21 |
10 |
3 |
6 |
2 |
0 |
0 |
|
 |
14 |
 |
2.67 |
2.74 |
112.8 |
-2.33 |
-0.47 |
29.4 |
79 |
20 |
10 |
4 |
5 |
2 |
0 |
0 |
|
 |
15 |
 |
1.11 |
2.19 |
113.2 |
-2.61 |
-0.53 |
25.4 |
82 |
14 |
6 |
8 |
2 |
2 |
0 |
0 |
|
 |
16 |
 |
1.41 |
3.22 |
117.0 |
-2.43 |
-0.62 |
27.5 |
85 |
12 |
7 |
8 |
5 |
0 |
0 |
0 |
|
 |
17 |
 |
2.64 |
2.72 |
118.5 |
-2.16 |
-0.49 |
28.3 |
80 |
22 |
9 |
5 |
5 |
2 |
0 |
0 |
|
 |
18 |
 |
1.52 |
3.17 |
121.7 |
-2.36 |
-0.56 |
26.7 |
84 |
13 |
8 |
7 |
6 |
1 |
0 |
0 |
|
 |
19 |
 |
1.78 |
3.84 |
128.5 |
-2.58 |
-0.46 |
32.0 |
82 |
18 |
11 |
7 |
5 |
3 |
0 |
0 |
|
 |
20 |
 |
2.68 |
2.74 |
130.9 |
-2.20 |
-0.48 |
29.0 |
80 |
24 |
10 |
3 |
7 |
3 |
0 |
0 |
|
 |
21 |
 |
1.43 |
1.91 |
132.2 |
-2.11 |
-0.46 |
28.9 |
78 |
20 |
12 |
2 |
6 |
2 |
0 |
0 |
|
 |
22 |
 |
1.80 |
3.80 |
133.4 |
-2.60 |
-0.45 |
28.9 |
83 |
20 |
11 |
10 |
4 |
2 |
1 |
0 |
|
 |
23 |
 |
1.39 |
1.92 |
139.4 |
-2.35 |
-0.52 |
30.8 |
79 |
21 |
14 |
3 |
5 |
2 |
0 |
0 |
|
 |
24 |
 |
1.34 |
1.38 |
141.2 |
-2.19 |
-0.30 |
19.6 |
78 |
18 |
5 |
10 |
1 |
4 |
10 |
0 |
|
 |
25 |
 |
1.70 |
3.89 |
155.9 |
-2.45 |
-0.30 |
27.7 |
79 |
25 |
12 |
9 |
6 |
4 |
10 |
0 |
|
 |
26 |
 |
1.18 |
2.27 |
169.4 |
-2.12 |
-0.53 |
23.6 |
82 |
19 |
11 |
9 |
6 |
2 |
0 |
0 |
|
 |
27 |
 |
2.63 |
2.65 |
169.5 |
-2.07 |
-0.51 |
23.5 |
82 |
23 |
6 |
11 |
10 |
1 |
0 |
0 |
|
 |
28 |
 |
2.46 |
2.51 |
191.9 |
-1.93 |
-0.48 |
22.4 |
81 |
28 |
8 |
12 |
10 |
2 |
0 |
0 |
|
 |
29 |
 |
1.37 |
2.18 |
212.9 |
-2.06 |
-0.49 |
24.6 |
80 |
26 |
13 |
10 |
10 |
2 |
0 |
0 |
|
 |
30 |
 |
2.52 |
2.52 |
214.1 |
-1.76 |
-0.49 |
21.9 |
83 |
28 |
10 |
11 |
16 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |