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PDBsum entry 4bge
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Pore analysis for: 4bge calculated with  MOLE 2.0
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PDB id
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4bge
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.54 |
1.54 |
26.2 |
-0.93 |
-0.45 |
3.6 |
83 |
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0 |
1 |
3 |
4 |
1 |
2 |
0 |
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2 |
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1.77 |
2.09 |
28.0 |
-1.68 |
-0.57 |
22.6 |
74 |
2 |
3 |
0 |
2 |
0 |
2 |
0 |
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3 |
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1.19 |
1.18 |
36.5 |
-0.03 |
0.17 |
13.0 |
66 |
2 |
0 |
0 |
6 |
3 |
2 |
0 |
PYW 1270 C
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4 |
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1.56 |
1.69 |
111.0 |
-0.64 |
-0.05 |
17.4 |
82 |
7 |
8 |
4 |
12 |
4 |
2 |
0 |
PYW 1270 B
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5 |
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1.70 |
1.76 |
111.9 |
-0.40 |
0.05 |
14.8 |
80 |
8 |
4 |
2 |
12 |
3 |
2 |
0 |
PYW 1270 B
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6 |
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1.32 |
1.53 |
239.4 |
0.60 |
0.31 |
8.8 |
79 |
7 |
5 |
8 |
32 |
9 |
4 |
0 |
PYW 1270 B PYW 1270 D PYW 1270 F
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7 |
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1.16 |
1.49 |
284.4 |
-0.94 |
-0.29 |
13.1 |
78 |
9 |
8 |
10 |
14 |
5 |
5 |
0 |
PYW 1270 E
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8 |
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1.59 |
1.70 |
30.6 |
1.70 |
0.54 |
1.7 |
80 |
1 |
0 |
0 |
10 |
2 |
1 |
0 |
PYW 1270 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program