PDBsum entry 4b7d

Pore analysis for: 4b7d calculated with

MOLE 2.0

PDB id

4b7d

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

2 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.34

1.48

50.5

-0.26

-0.09

14.5

83

3

3

1

11

3

3

0

GOL 1406 B HEM 1407 B QLE 1408 B

2

1.40

1.55

57.0

-0.06

-0.10

11.8

83

3

3

1

9

2

4

0

GOL 1406 A HEM 1407 A QLE 1408 A

3

1.16

1.67

56.9

0.90

0.16

8.8

78

3

2

0

13

1

1

1

HEM 1407 A QLE 1408 A

4

1.12

1.68

61.9

0.79

0.32

11.0

77

2

3

1

12

3

2

0

GOL 1406 A HEM 1407 A QLE 1408 A

5

1.16

1.69

94.6

0.60

0.22

11.2

78

5

1

0

13

2

1

1

HEM 1407 A QLE 1408 A

6

1.41

1.56

99.6

-0.18

-0.02

13.6

83

6

2

1

10

3

3

0

GOL 1406 A HEM 1407 A QLE 1408 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.