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PDBsum entry 4b7c

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Pore analysis for: 4b7c calculated with MOLE 2.0 PDB id
4b7c
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.65 2.90 34.7 -2.05 -0.60 23.9 76 4 7 2 2 1 2 0  
2 2.91 3.87 47.4 -1.79 -0.29 20.4 77 7 3 3 2 2 1 0  
3 2.97 3.27 54.7 -2.44 -0.47 26.9 75 9 5 2 1 3 2 0  
4 3.35 3.63 56.4 -3.17 -0.60 28.9 77 13 6 6 0 2 1 0  
5 1.51 1.51 57.5 -0.18 0.00 13.3 80 3 3 4 10 4 2 0  MES 1335 I
6 1.19 2.58 59.9 -0.16 -0.11 12.9 84 4 5 1 12 0 1 0  
7 2.41 3.69 63.2 -2.51 -0.65 27.9 79 10 4 2 2 1 0 0  
8 2.90 3.86 68.8 -2.27 -0.45 25.5 77 9 7 4 2 2 1 0  
9 2.16 2.33 74.1 -2.01 -0.57 29.4 80 10 9 1 5 1 0 1  
10 2.10 2.35 75.5 -2.65 -0.53 35.5 80 17 9 1 4 0 0 1  
11 2.38 2.86 76.7 -2.30 -0.47 25.2 82 9 5 4 4 1 2 0  
12 1.48 1.48 87.5 -0.88 -0.16 15.3 79 10 4 6 10 6 2 0  MES 1335 I
13 2.34 3.68 98.0 -2.56 -0.59 29.9 80 14 9 2 3 1 1 0  
14 2.24 2.29 97.8 -2.00 -0.55 26.5 79 11 8 2 5 2 1 0  
15 2.13 2.35 98.1 -1.71 -0.50 27.7 80 9 10 1 7 1 1 1  
16 1.49 2.42 100.3 -0.17 -0.16 10.9 76 5 1 4 4 2 2 0  
17 2.18 2.21 103.5 -2.48 -0.65 28.3 80 12 10 4 3 2 1 0  
18 2.63 4.15 108.8 -2.80 -0.53 32.4 78 20 10 4 3 3 1 0  
19 2.38 3.64 113.4 -3.05 -0.60 34.7 79 20 11 5 3 1 1 0  
20 2.23 2.21 117.9 -2.53 -0.51 34.1 80 21 13 1 6 1 1 1  
21 1.74 1.74 119.3 -2.70 -0.47 34.2 78 21 9 2 4 3 1 0  
22 1.69 1.94 125.5 0.09 0.13 13.3 78 6 4 3 11 4 3 0  MES 1335 I
23 2.17 2.21 138.1 -2.51 -0.50 32.4 79 21 11 2 6 2 2 0  
24 2.45 3.97 137.1 -2.41 -0.55 27.9 79 17 13 4 4 3 2 0  
25 1.80 2.95 145.9 -1.51 -0.31 23.3 80 18 11 4 13 5 2 0  MES 1335 H
26 2.32 3.74 143.8 -2.83 -0.55 33.5 80 22 13 4 4 2 2 0  
27 1.75 1.93 147.5 -2.25 -0.51 28.8 79 18 12 2 5 3 2 0  
28 2.42 2.31 149.2 -2.44 -0.65 27.8 80 16 17 7 4 2 2 0  
29 1.62 2.13 155.5 -0.55 -0.01 15.5 77 13 4 6 11 6 3 0  MES 1335 I
30 1.75 2.90 203.3 -1.98 -0.34 27.3 78 32 15 6 13 7 3 0  MES 1335 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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