PDBsum entry 4b6a Go to PDB code:  Tunnel analysis for: 4b6a calculated with MOLE 2.0 PDB id 4b6a Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   33 tunnels, coloured by tunnel radius 33 tunnels, coloured by tunnel radius 33 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.43 27.2 -0.83 -0.10 19.2 80 7 0 1 4 1 1 0   2 1.14 1.21 28.4 -1.18 -0.28 21.6 78 7 0 1 4 0 1 0   3 1.35 1.67 26.7 -0.56 -0.33 13.1 88 4 1 3 6 0 1 0   4 1.20 1.61 28.3 0.35 -0.20 5.4 90 1 1 2 7 0 0 0   5 1.28 2.37 25.7 0.13 0.24 15.7 79 4 1 1 6 2 0 0   6 1.29 2.30 30.2 0.23 0.33 11.4 79 2 2 2 7 2 1 0   7 1.46 1.49 17.3 -0.36 -0.49 5.6 94 1 0 3 4 0 0 0   8 2.02 2.78 15.9 -1.39 -0.25 24.7 80 4 0 0 2 0 0 0   9 1.51 1.56 18.9 -1.35 0.08 11.8 82 4 0 1 2 2 1 0   10 1.26 1.26 19.0 -1.61 -0.66 15.4 87 4 0 1 0 0 1 0   11 1.59 1.59 15.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 58 K UNK 79 K UNK 82 K UNK 83 K UNK 104 K UNK 105 K UNK 106 K UNK 110 K UNK 136 K UNK 137 K UNK 139 K UNK 140 K UNK 142 K 12 1.85 1.85 15.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 104 K UNK 105 K UNK 106 K UNK 107 K UNK 110 K UNK 134 K UNK 137 K UNK 140 K UNK 142 K UNK 143 K UNK 151 K UNK 152 K UNK 154 K UNK 155 K UNK 156 K 13 1.86 1.86 17.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 82 K UNK 85 K UNK 104 K UNK 105 K UNK 106 K UNK 107 K UNK 110 K UNK 134 K UNK 137 K UNK 140 K UNK 142 K UNK 143 K UNK 151 K UNK 152 K UNK 154 K UNK 155 K UNK 156 K 14 1.25 1.25 18.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 82 K UNK 85 K UNK 104 K UNK 105 K UNK 106 K UNK 110 K UNK 134 K UNK 135 K UNK 137 K UNK 138 K UNK 140 K UNK 142 K UNK 148 K UNK 149 K 15 1.22 2.29 17.4 0.76 0.60 3.7 58 1 0 0 2 2 1 0   16 1.18 2.35 23.7 -0.92 0.13 15.9 75 3 0 1 3 1 0 0   17 1.62 1.77 18.7 -3.03 -0.49 19.2 76 5 0 3 0 2 0 0   18 1.51 1.51 24.7 -1.69 -0.42 23.8 84 6 0 0 3 0 1 0   19 1.35 2.29 16.2 -0.40 -0.13 7.3 75 1 1 0 1 2 0 0   20 1.37 1.66 19.4 -1.20 -0.24 20.1 82 3 1 2 3 1 0 0   21 1.21 2.84 20.0 2.13 1.18 0.8 83 0 0 2 6 2 0 0   22 1.16 2.21 15.2 0.55 0.06 14.6 84 1 1 0 7 0 0 0   23 1.20 1.20 19.7 0.93 0.20 9.6 79 1 1 1 8 0 1 0   24 1.43 2.78 17.8 -0.91 0.22 19.5 72 3 0 1 2 2 1 0   25 1.15 1.72 20.0 2.20 0.96 8.6 81 2 0 1 6 1 0 0   26 1.11 1.63 26.2 1.05 0.55 12.6 82 3 1 1 7 1 0 0   27 1.17 1.17 27.6 -0.32 0.28 8.4 77 2 0 1 3 1 2 0   28 1.38 1.38 15.8 0.17 0.02 9.7 74 1 1 2 2 1 1 0   29 1.27 1.99 17.6 -0.66 0.09 19.9 80 2 3 0 2 1 0 0   30 1.23 1.54 18.7 -1.08 -0.26 18.6 66 3 1 0 2 3 0 0   31 1.12 1.70 17.0 0.17 -0.27 8.4 85 1 0 0 5 0 0 0   32 1.23 1.30 15.6 -1.39 0.15 9.2 73 2 0 1 2 2 1 0   33 1.11 1.11 15.1 -0.23 -0.41 4.4 90 0 1 3 2 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.