PDBsum entry 4b2d Go to PDB code:  Pore analysis for: 4b2d calculated with MOLE 2.0 PDB id 4b2d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   16 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.59 30.6 0.81 0.07 6.6 86 2 1 2 6 1 0 0   2 1.33 1.51 31.4 -0.10 -0.14 5.7 76 2 1 1 4 2 2 0   3 1.32 1.79 32.0 0.55 -0.12 4.6 79 1 2 3 6 0 0 1   4 1.40 1.61 32.1 -0.36 -0.18 8.6 88 3 1 3 5 2 0 0  FBP 600 D 5 1.46 1.66 34.0 -0.48 -0.24 10.4 83 3 1 4 5 3 0 0  FBP 600 B 6 1.46 1.62 35.0 -0.86 0.09 15.2 73 3 2 0 5 3 1 0  FBP 600 B 7 1.31 1.78 36.3 -0.24 -0.12 12.1 79 3 1 3 3 0 0 1   8 1.69 1.78 36.8 -0.31 -0.21 6.3 75 3 1 2 4 1 2 0   9 1.61 2.53 39.5 -2.04 -0.72 27.9 80 4 8 0 3 0 1 0   10 2.18 2.48 39.8 -2.93 -0.59 31.0 86 6 3 3 1 0 1 0   11 1.60 1.76 46.3 -1.88 -0.49 23.7 82 6 5 4 2 2 0 0   12 1.75 3.17 50.4 -1.48 -0.49 25.3 81 6 9 4 4 3 0 0   13 1.79 1.79 54.6 -1.82 -0.44 26.2 81 7 5 2 1 2 1 0   14 1.74 3.35 61.5 -2.19 -0.42 22.0 79 4 3 5 0 2 3 0   15 1.17 1.22 65.1 -1.22 -0.40 22.2 78 5 7 2 5 3 1 0   16 1.41 1.61 100.3 -0.93 0.03 15.4 75 6 3 1 6 3 4 0  FBP 600 D 17 1.58 1.73 147.6 -1.58 -0.31 23.0 81 16 8 4 10 1 4 0   18 1.41 1.58 147.6 -2.19 -0.52 28.3 78 12 13 4 7 1 4 0   19 1.88 1.89 59.1 -2.35 -0.42 30.6 79 8 5 3 1 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.