PDBsum entry 4ayb Go to PDB code:  Pore analysis for: 4ayb calculated with MOLE 2.0 PDB id 4ayb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.75 28.1 0.23 0.37 11.8 79 1 2 2 5 2 0 0   2 1.76 3.85 45.7 -1.90 -0.34 26.7 87 4 2 4 3 0 0 0   3 1.29 1.76 53.4 -1.03 -0.17 18.8 79 4 5 4 5 4 0 0   4 1.25 1.27 59.1 -0.98 -0.29 17.9 85 5 6 5 7 2 1 0   5 1.15 2.44 76.6 -1.38 -0.28 14.3 80 9 2 4 5 6 2 0   6 2.20 2.17 79.7 -1.08 -0.12 16.8 81 10 3 3 5 3 4 0   7 1.38 2.56 80.6 -1.89 -0.28 25.8 77 9 6 3 5 4 3 0   8 1.19 1.76 87.1 -0.54 0.03 15.5 80 6 4 3 9 4 2 0   9 2.25 3.68 91.1 -2.39 -0.47 30.2 78 11 4 3 1 3 1 0   10 1.26 1.62 113.5 -1.27 -0.06 21.5 77 10 3 2 5 4 3 0   11 2.31 3.67 122.8 -2.28 -0.54 22.8 83 14 8 8 2 3 2 0  MG 1884 A 12 1.30 1.44 126.5 -1.63 -0.33 18.1 83 12 7 7 6 2 2 0  MG 1884 A 13 2.45 2.47 141.2 -2.57 -0.55 26.8 84 23 8 6 6 2 4 0   14 1.31 2.06 145.2 -1.69 -0.30 19.1 83 13 7 7 6 3 4 0  MG 1884 A 15 2.12 2.26 163.7 -1.87 -0.38 23.1 85 19 8 7 9 2 3 0   16 1.31 1.41 240.8 -1.54 -0.24 21.4 81 23 9 9 15 5 5 0   17 2.14 2.44 248.3 -1.91 -0.31 23.7 81 25 7 8 11 5 6 0   18 1.44 2.69 275.8 -1.68 -0.21 22.4 79 26 11 9 16 7 7 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.