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PDBsum entry 4aa6

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 4aa6 calculated with MOLE 2.0 PDB id
4aa6
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.36 2.45 26.8 -1.25 -0.70 11.4 69 2 0 1 0 1 0 0  DG 11 C DT 12 C DT 10 D DG 11 D
2 2.01 2.01 110.5 -1.12 -0.76 8.0 78 4 0 3 0 2 0 0  DC 1 C DC 15 D DT 16 D DA 10 G DG 11 G DG 18 G DT
1 H DG 4 H DG 5 H DT 6 H DG 11 H DT 12 H DG 13 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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