PDBsum entry 4a8f Go to PDB code:  Pore analysis for: 4a8f calculated with MOLE 2.0 PDB id 4a8f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 1.74 37.6 -2.05 -0.52 23.6 81 6 5 2 2 3 0 0  ATP 1665 B ATP 1666 B MG 1667 B 2 1.94 2.21 39.4 -1.55 -0.58 21.6 80 4 3 2 1 2 0 0  DG 5 G DC 6 G 3 1.43 1.96 41.6 -2.51 -0.65 25.2 84 4 7 4 2 1 1 0  MG 1665 A ATP 1666 A ATP 1667 A 4 2.52 2.57 44.4 -2.15 -0.45 23.9 84 6 5 8 2 2 0 1  MG 1665 A ATP 1666 A ATP 1667 A 5 1.43 1.65 47.4 -1.57 -0.42 16.4 84 8 1 7 5 1 1 1   6 1.81 1.96 49.3 -0.82 -0.40 16.0 83 4 5 3 5 1 1 0   7 1.48 1.71 50.8 -2.25 -0.52 22.7 85 7 7 4 4 1 1 0  ATP 1665 B ATP 1666 B MG 1667 B 8 1.49 1.70 52.1 -1.57 -0.39 17.4 83 7 1 5 4 1 1 0  DG 5 G DC 6 G DG 7 G 9 1.82 1.95 53.4 -0.51 -0.36 13.9 82 4 5 3 6 2 1 0  DG 5 G DC 6 G 10 1.89 1.89 57.2 -2.22 -0.65 29.0 77 5 6 2 3 1 0 0   11 1.69 1.84 60.6 -2.34 -0.56 25.5 84 10 4 5 2 2 0 0  ATP 1665 B ATP 1666 B MG 1667 B DG 5 G DC 6 G DG 7 G 12 1.47 1.70 62.7 -2.01 -0.44 18.9 83 8 7 5 3 3 1 0  ATP 1665 B ATP 1666 B 13 1.51 2.28 72.0 -1.95 -0.46 19.1 81 10 2 7 2 4 0 0  ATP 1665 B ATP 1666 B DG 5 G DC 6 G DG 7 G 14 1.64 1.73 81.2 -2.20 -0.42 28.6 79 9 5 5 3 3 0 0   15 2.18 2.28 39.9 -2.12 -0.48 22.9 87 4 6 3 4 1 0 0   16 1.26 1.26 53.2 -1.59 -0.36 17.7 86 5 3 7 4 3 0 1  ATP 1665 C ATP 1666 C 17 1.23 1.28 96.5 -1.59 -0.44 15.6 84 9 4 9 10 3 1 1   18 1.22 1.27 101.0 -1.82 -0.39 21.5 83 11 6 7 8 3 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.