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PDBsum entry 4a3f
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Tunnel analysis for: 4a3f calculated with  MOLE 2.0
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PDB id
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4a3f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.32 |
57.8 |
-0.35 |
-0.42 |
7.0 |
81 |
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1 |
3 |
3 |
7 |
1 |
3 |
1 |
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DC 5 P DC 6 P DA 7 P DG 8 P DG 9 P DC 21 T
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2 |
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1.22 |
1.36 |
58.3 |
-0.46 |
-0.48 |
8.2 |
82 |
2 |
3 |
3 |
5 |
1 |
1 |
1 |
DC 5 P DC 6 P DA 7 P DG 8 P DG 9 P DC 21 T
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3 |
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1.19 |
1.32 |
59.6 |
-0.03 |
-0.33 |
4.8 |
84 |
1 |
1 |
3 |
10 |
1 |
3 |
1 |
DA 2 N DC 5 P DC 6 P DA 7 P DG 8 P DG 9 P DT 17 T
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4 |
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1.21 |
1.39 |
60.1 |
-0.10 |
-0.39 |
5.3 |
85 |
2 |
1 |
3 |
8 |
1 |
1 |
1 |
DA 2 N DC 5 P DC 6 P DA 7 P DG 8 P DG 9 P DT 17 T
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5 |
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1.32 |
2.34 |
21.6 |
0.59 |
0.36 |
12.2 |
78 |
1 |
3 |
1 |
9 |
3 |
1 |
0 |
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6 |
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1.08 |
2.75 |
21.4 |
-0.41 |
0.01 |
16.8 |
85 |
4 |
1 |
1 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program