 |
PDBsum entry 4a3b
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4a3b calculated with MOLE 2.0
|
PDB id
|
|
|
|
4a3b
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
7 tunnels,
coloured by tunnel radius |
 |
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.56 |
2.01 |
22.1 |
0.17 |
0.00 |
12.4 |
78 |
 |
2 |
3 |
2 |
6 |
3 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.47 |
1.88 |
24.8 |
0.48 |
0.21 |
11.5 |
76 |
2 |
3 |
1 |
7 |
4 |
0 |
0 |
|
 |
3 |
 |
1.38 |
1.38 |
16.8 |
0.25 |
0.32 |
11.1 |
78 |
3 |
1 |
1 |
4 |
1 |
0 |
0 |
|
 |
4 |
 |
1.46 |
1.66 |
18.4 |
0.58 |
0.29 |
12.3 |
80 |
2 |
1 |
0 |
4 |
1 |
0 |
0 |
|
 |
5 |
 |
1.45 |
1.81 |
23.8 |
0.39 |
0.10 |
11.2 |
82 |
2 |
1 |
1 |
4 |
1 |
0 |
0 |
|
 |
6 |
 |
1.35 |
1.34 |
21.2 |
-0.20 |
0.08 |
5.8 |
68 |
1 |
2 |
1 |
5 |
2 |
2 |
0 |
|
 |
7 |
 |
1.34 |
1.34 |
16.6 |
1.78 |
0.66 |
8.0 |
82 |
2 |
0 |
1 |
7 |
0 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |