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PDBsum entry 4a2m

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Pore analysis for: 4a2m calculated with MOLE 2.0 PDB id
4a2m
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.37 25.8 -0.56 -0.34 11.8 94 3 1 4 2 0 1 0  
2 1.27 2.44 28.1 1.97 0.65 6.8 85 2 2 1 8 1 0 0  
3 2.34 3.33 35.7 -1.91 -0.54 24.0 88 6 6 4 3 2 0 0  
4 4.25 4.51 43.5 -1.84 -0.64 23.5 91 4 4 4 4 1 0 0  
5 2.53 2.71 44.7 -2.23 -0.68 12.9 93 2 4 10 1 0 0 0  
6 2.33 2.34 60.3 -1.36 -0.51 12.5 87 5 3 6 2 4 0 0  
7 1.28 2.46 74.6 -0.38 -0.14 16.9 85 7 7 5 9 2 0 0  
8 1.29 2.23 81.7 -0.23 0.04 12.1 82 7 4 9 11 3 2 0  NGS 1 H
9 1.46 2.30 105.5 -0.93 -0.32 16.3 84 10 5 9 9 3 1 0  
10 1.30 2.23 109.3 -1.15 -0.33 21.6 87 12 8 10 13 1 1 0  
11 1.47 3.06 114.2 -1.75 -0.46 17.8 83 11 7 13 6 4 2 0  NGS 1 H
12 1.49 3.06 124.1 -1.81 -0.43 19.3 84 13 10 15 9 4 2 0  NGS 1 H
13 1.67 2.01 125.2 -1.44 -0.28 12.5 84 8 6 19 7 7 1 1  NGS 1 E GCD 2 E
14 2.28 3.02 124.7 -1.52 -0.45 13.5 88 6 7 21 6 3 3 0  
15 2.56 2.69 137.5 -1.64 -0.46 14.7 84 8 4 18 6 2 3 0  
16 1.75 1.89 154.9 -1.53 -0.56 12.1 88 9 9 21 8 2 2 0  
17 1.72 2.17 167.1 -1.48 -0.41 13.7 82 11 8 17 10 6 1 1  NGS 1 E GCD 2 E
18 1.75 2.08 165.4 -1.67 -0.40 14.4 86 11 10 23 8 6 1 1  NGS 1 E GCD 2 E
19 1.88 1.98 175.1 -1.74 -0.59 13.2 89 7 11 26 5 3 3 0  
20 1.65 1.81 185.8 -1.65 -0.57 13.8 89 9 15 30 8 4 2 0  
21 1.28 2.51 236.2 -0.93 -0.30 11.8 86 10 13 27 16 6 4 0  NGS 1 G
22 1.37 2.51 248.4 -0.94 -0.21 12.8 83 13 12 23 18 9 2 1  NGS 1 E GCD 2 E NGS 1 G
23 1.27 3.86 247.9 -0.79 -0.27 13.6 86 12 9 20 17 4 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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