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PDBsum entry 448d

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Top Page dna_rna ligands tunnels links
Tunnel analysis for: 448d calculated with MOLE 2.0 PDB id
448d
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.94 8.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  10 DG A,11 DC A,12 DG A,15 DC B,16 DG B,17 DA B
2 2.12 10.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  10 DG A,11 DC A,16 DG B,17 DA B,18 DA B,25 IB B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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