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PDBsum entry 3x3c

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Membrane protein PDB id
3x3c
Contents
Protein chain
271 a.a.
Ligands
RET
OLA ×3
Waters ×67

References listed in PDB file
Key reference
Title Structural basis for na(+) transport mechanism by a light-Driven na(+) pump.
Authors H.E.Kato, K.Inoue, R.Abe-Yoshizumi, Y.Kato, H.Ono, M.Konno, S.Hososhima, T.Ishizuka, M.R.Hoque, H.Kunitomo, J.Ito, S.Yoshizawa, K.Yamashita, M.Takemoto, T.Nishizawa, R.Taniguchi, K.Kogure, A.D.Maturana, Y.Iino, H.Yawo, R.Ishitani, H.Kandori, O.Nureki.
Ref. Nature, 2015, 521, 48-53. [DOI no: 10.1038/nature14322]
PubMed id 25849775
Abstract
Krokinobacter eikastus rhodopsin 2 (KR2) is the first light-driven Na(+) pump discovered, and is viewed as a potential next-generation optogenetics tool. Since the positively charged Schiff base proton, located within the ion-conducting pathway of all light-driven ion pumps, was thought to prohibit the transport of a non-proton cation, the discovery of KR2 raised the question of how it achieves Na(+) transport. Here we present crystal structures of KR2 under neutral and acidic conditions, which represent the resting and M-like intermediate states, respectively. Structural and spectroscopic analyses revealed the gating mechanism, whereby the flipping of Asp116 sequesters the Schiff base proton from the conducting pathway to facilitate Na(+) transport. Together with the structure-based engineering of the first light-driven K(+) pumps, electrophysiological assays in mammalian neurons and behavioural assays in a nematode, our studies reveal the molecular basis for light-driven non-proton cation pumps and thus provide a framework that may advance the development of next-generation optogenetics.
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