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PDBsum entry 3wcf

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3wcf calculated with MOLE 2.0 PDB id
3wcf
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.91 3.36 37.0 -2.76 -0.53 39.5 81 5 6 0 1 1 0 0  BH8 401 C
2 1.65 1.65 39.6 -2.61 -0.49 39.3 80 4 4 1 4 1 0 0  
3 2.88 3.61 54.8 -1.85 -0.48 20.9 81 9 5 5 4 1 3 0  
4 2.21 2.75 68.3 -2.12 -0.51 24.8 84 7 6 5 1 1 2 0  
5 2.29 2.76 80.4 -2.14 -0.58 24.9 82 10 7 5 4 0 3 0  
6 1.58 3.05 96.6 0.03 0.15 18.6 79 8 7 2 13 2 0 0  BH8 401 B
7 1.65 2.66 186.5 -1.05 -0.22 17.4 83 17 8 13 12 4 2 0  
8 1.40 1.42 190.4 -1.24 -0.29 17.8 81 17 11 13 15 4 3 0  
9 1.60 1.79 190.2 -2.03 -0.41 23.6 83 18 12 12 4 5 2 0  
10 1.58 1.71 202.6 -2.15 -0.53 24.4 84 16 16 12 4 4 2 0  
11 1.42 1.45 210.5 -1.37 -0.36 18.6 81 17 13 13 14 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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