 |
PDBsum entry 3w3y
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3w3y calculated with MOLE 2.0
|
PDB id
|
|
|
|
3w3y
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
7 tunnels,
coloured by tunnel radius |
 |
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.37 |
1.37 |
15.7 |
-2.65 |
-0.71 |
25.7 |
96 |
 |
2 |
1 |
3 |
0 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.55 |
4.34 |
16.0 |
-1.91 |
-0.06 |
19.9 |
80 |
3 |
1 |
2 |
1 |
3 |
0 |
0 |
|
 |
3 |
 |
1.52 |
4.29 |
17.8 |
-1.92 |
-0.18 |
20.4 |
74 |
2 |
3 |
1 |
0 |
4 |
0 |
0 |
|
 |
4 |
 |
1.52 |
4.28 |
19.3 |
-2.00 |
-0.14 |
19.5 |
82 |
3 |
1 |
3 |
1 |
3 |
0 |
0 |
|
 |
5 |
 |
1.51 |
4.25 |
19.4 |
-1.92 |
-0.37 |
24.8 |
76 |
1 |
4 |
0 |
1 |
3 |
0 |
0 |
|
 |
6 |
 |
1.37 |
1.37 |
21.9 |
-2.63 |
-0.67 |
32.2 |
88 |
2 |
3 |
2 |
1 |
1 |
0 |
0 |
|
 |
7 |
 |
1.21 |
1.27 |
17.6 |
0.98 |
0.27 |
5.8 |
70 |
0 |
1 |
0 |
5 |
3 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |