PDBsum entry 3w3w Go to PDB code:  Tunnel analysis for: 3w3w calculated with MOLE 2.0 PDB id 3w3w Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.51 21.5 -2.11 -0.53 19.9 92 3 1 6 3 1 0 0   2 1.21 1.51 28.9 -2.08 -0.30 19.2 85 4 2 5 2 3 0 0   3 1.20 1.28 16.1 -1.26 -0.56 10.0 83 3 0 1 1 1 1 0   4 1.56 1.90 16.1 -1.80 -0.35 16.3 84 2 2 2 4 1 0 0   5 1.10 2.66 19.9 3.09 0.88 0.6 68 0 0 1 9 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.