PDBsum entry 3w2d Go to PDB code:  Tunnel analysis for: 3w2d calculated with MOLE 2.0 PDB id 3w2d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.33 15.8 -1.95 -0.56 28.4 82 2 2 0 1 0 0 0   2 1.18 1.35 15.3 2.46 0.69 3.3 89 0 1 0 7 0 0 0   3 1.18 1.26 15.7 2.59 0.77 3.1 85 0 1 0 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.