PDBsum entry 3vzc Go to PDB code:  Pore analysis for: 3vzc calculated with MOLE 2.0 PDB id 3vzc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.41 2.41 27.1 -1.40 -0.44 20.7 80 4 2 3 3 1 0 0   2 1.74 1.78 36.0 -2.37 -0.51 24.9 82 5 1 3 1 1 0 0   3 1.54 2.31 53.3 -2.66 -0.66 33.3 82 5 5 2 2 0 1 0   4 1.20 1.63 53.5 -0.04 0.03 15.7 72 3 4 1 10 4 0 0  UUL 1001 D 5 1.54 2.35 69.5 -2.79 -0.59 33.8 84 8 4 3 2 1 1 0   6 2.02 3.63 71.5 -0.82 -0.35 15.4 92 6 1 4 5 0 2 0   7 1.75 2.07 73.5 -1.87 -0.62 20.8 85 5 4 6 3 0 4 0   8 2.33 2.47 76.6 -0.92 -0.17 10.7 82 3 2 5 6 5 3 0   9 1.22 1.39 80.0 -0.96 -0.13 13.2 77 7 2 2 7 3 4 0   10 1.18 1.31 84.0 -0.61 -0.24 7.0 82 5 1 5 9 3 6 0   11 1.99 3.65 83.7 -1.07 -0.13 13.2 80 6 3 2 6 6 2 0   12 2.31 2.47 86.5 -0.89 -0.16 12.6 76 4 3 2 5 5 2 0   13 1.17 1.32 88.5 -0.74 -0.22 8.5 81 6 0 5 8 4 4 0   14 1.17 1.29 107.7 -1.04 -0.20 9.9 77 5 2 4 7 6 3 0   15 1.75 2.49 109.1 -2.52 -0.63 27.4 81 9 7 7 4 1 3 0   16 1.33 1.40 121.7 -1.04 -0.29 10.2 83 6 2 6 10 3 7 0   17 1.23 1.35 132.8 -1.17 -0.08 10.3 76 5 4 4 11 9 7 0   18 1.60 3.11 184.2 -1.37 -0.37 20.1 82 11 7 5 8 3 2 0   19 1.26 1.26 213.1 -0.91 -0.34 15.5 85 8 8 8 13 3 4 0   20 1.36 1.36 172.6 -0.87 -0.12 9.5 77 3 2 4 6 4 3 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.