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PDBsum entry 3vz3
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Pore analysis for: 3vz3 calculated with  MOLE 2.0
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PDB id
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3vz3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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16 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.77 |
2.95 |
28.5 |
-0.23 |
0.17 |
10.0 |
79 |
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3 |
0 |
4 |
5 |
5 |
1 |
0 |
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SSN 501 B NAP 502 B
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2 |
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1.76 |
2.97 |
30.3 |
-0.55 |
0.02 |
12.0 |
77 |
3 |
1 |
4 |
5 |
5 |
1 |
0 |
SSN 501 A NAP 502 A
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3 |
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1.85 |
1.85 |
38.9 |
-0.93 |
-0.28 |
15.2 |
74 |
6 |
2 |
0 |
4 |
1 |
2 |
0 |
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4 |
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1.21 |
1.49 |
39.0 |
-0.58 |
-0.17 |
15.7 |
71 |
4 |
3 |
0 |
6 |
4 |
1 |
0 |
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5 |
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1.25 |
1.52 |
45.4 |
-0.63 |
-0.22 |
12.7 |
72 |
3 |
3 |
1 |
6 |
5 |
1 |
0 |
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6 |
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1.51 |
1.92 |
48.9 |
-1.21 |
-0.35 |
14.5 |
76 |
8 |
3 |
3 |
4 |
2 |
2 |
0 |
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7 |
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1.51 |
1.65 |
59.3 |
-1.86 |
-0.45 |
15.2 |
78 |
3 |
3 |
6 |
3 |
2 |
2 |
0 |
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8 |
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1.56 |
2.45 |
63.6 |
-1.22 |
-0.43 |
10.1 |
75 |
8 |
1 |
3 |
2 |
3 |
4 |
0 |
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9 |
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1.84 |
1.99 |
64.4 |
-1.35 |
-0.33 |
18.6 |
73 |
7 |
5 |
1 |
4 |
1 |
4 |
0 |
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10 |
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1.25 |
1.52 |
65.9 |
-0.92 |
-0.30 |
12.7 |
74 |
9 |
1 |
1 |
7 |
5 |
3 |
0 |
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11 |
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1.83 |
1.83 |
67.6 |
-1.36 |
-0.37 |
17.0 |
75 |
7 |
5 |
2 |
4 |
1 |
4 |
0 |
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12 |
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1.51 |
1.64 |
70.6 |
-2.60 |
-0.60 |
21.4 |
79 |
8 |
6 |
6 |
2 |
1 |
4 |
0 |
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13 |
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1.82 |
2.05 |
81.4 |
-1.30 |
-0.33 |
17.1 |
74 |
6 |
4 |
4 |
6 |
3 |
2 |
0 |
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14 |
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1.57 |
1.92 |
92.3 |
-1.44 |
-0.47 |
11.8 |
75 |
9 |
4 |
5 |
2 |
3 |
6 |
0 |
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15 |
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1.84 |
1.84 |
105.4 |
-1.55 |
-0.48 |
14.1 |
73 |
9 |
6 |
3 |
2 |
2 |
8 |
0 |
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16 |
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1.79 |
2.06 |
119.1 |
-1.39 |
-0.46 |
12.9 |
76 |
8 |
5 |
7 |
5 |
4 |
5 |
0 |
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17 |
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1.76 |
2.10 |
122.0 |
-1.51 |
-0.47 |
13.8 |
74 |
7 |
5 |
6 |
4 |
4 |
6 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program