PDBsum entry 3vz0 Go to PDB code:  Pore analysis for: 3vz0 calculated with MOLE 2.0 PDB id 3vz0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.21 2.31 35.4 -2.01 -0.47 22.9 78 4 3 4 3 1 0 0   2 3.17 4.55 46.7 -1.76 -0.58 25.3 84 6 6 7 4 0 0 0   3 1.23 1.54 47.0 -0.50 -0.19 9.1 78 2 2 3 5 4 2 0  MSE 306 B MSE 336 B MSE 343 B 4 1.88 2.33 61.5 -1.28 -0.31 19.4 81 6 6 5 5 4 3 0   5 1.20 1.84 63.0 -0.23 0.02 5.0 78 1 2 6 7 7 2 1  2PE 501 A 6 1.14 1.39 65.4 -0.16 0.05 5.6 76 1 2 5 6 7 2 1  MSE 306 C MSE 336 C MSE 343 C 2PE 501 C 7 1.17 1.56 87.5 -1.92 -0.63 25.7 86 7 9 5 5 0 0 0   8 1.69 2.11 89.9 -1.35 -0.37 20.0 79 9 7 8 5 4 3 0   9 1.65 2.68 93.7 -1.77 -0.49 23.2 83 9 9 5 6 2 0 0  2PE 501 C 10 1.25 1.51 100.3 -0.94 -0.12 11.2 80 5 4 9 7 7 2 1  MSE 306 C MSE 343 C 2PE 501 C 11 1.17 1.81 111.4 -1.43 -0.30 16.1 80 6 7 8 7 8 2 1  2PE 501 A 2PE 501 D 12 1.53 3.23 119.8 -1.36 -0.17 19.0 79 11 8 7 6 9 1 1  2PE 501 B 2PE 501 C 13 1.36 3.44 131.2 -1.32 -0.21 19.1 78 10 10 10 6 13 2 1  2PE 501 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.