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PDBsum entry 3vyn
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Tunnel analysis for: 3vyn calculated with  MOLE 2.0
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PDB id
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3vyn
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.57 |
1.74 |
15.8 |
-1.07 |
-0.48 |
19.4 |
83 |
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3 |
2 |
0 |
1 |
1 |
0 |
0 |
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2 |
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1.43 |
1.43 |
25.2 |
-1.68 |
-0.68 |
22.9 |
81 |
3 |
2 |
1 |
2 |
1 |
0 |
0 |
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3 |
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1.57 |
1.73 |
26.1 |
-1.86 |
-0.68 |
23.8 |
82 |
2 |
4 |
0 |
0 |
1 |
0 |
0 |
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4 |
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1.43 |
1.43 |
27.9 |
-1.89 |
-0.74 |
23.7 |
75 |
3 |
3 |
1 |
1 |
1 |
1 |
0 |
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5 |
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1.36 |
1.47 |
28.5 |
-1.21 |
-0.63 |
13.1 |
84 |
2 |
1 |
1 |
0 |
2 |
0 |
0 |
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6 |
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1.36 |
1.48 |
36.0 |
-1.13 |
-0.54 |
13.2 |
80 |
2 |
2 |
2 |
1 |
3 |
0 |
0 |
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7 |
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1.18 |
3.43 |
15.9 |
1.78 |
0.33 |
1.4 |
86 |
0 |
0 |
0 |
7 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program