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PDBsum entry 3vxs
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Tunnel analysis for: 3vxs calculated with  MOLE 2.0
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PDB id
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3vxs
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.45 |
2.09 |
27.3 |
-1.23 |
-0.32 |
11.0 |
79 |
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3 |
2 |
2 |
2 |
2 |
1 |
0 |
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2 |
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1.33 |
1.39 |
40.0 |
-1.66 |
-0.35 |
20.8 |
82 |
6 |
4 |
3 |
4 |
2 |
1 |
0 |
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3 |
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2.30 |
2.35 |
18.4 |
-1.82 |
-0.65 |
23.0 |
86 |
5 |
2 |
0 |
0 |
0 |
0 |
0 |
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4 |
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2.25 |
2.33 |
19.8 |
-2.13 |
-0.74 |
27.3 |
83 |
4 |
3 |
0 |
0 |
0 |
0 |
0 |
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5 |
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1.98 |
2.80 |
20.9 |
-1.97 |
-0.49 |
20.7 |
77 |
3 |
1 |
2 |
1 |
1 |
1 |
0 |
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6 |
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1.22 |
1.22 |
21.0 |
-1.84 |
-0.60 |
23.6 |
82 |
5 |
2 |
0 |
0 |
1 |
0 |
0 |
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7 |
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1.21 |
1.21 |
22.4 |
-2.02 |
-0.70 |
25.9 |
79 |
4 |
3 |
0 |
0 |
1 |
0 |
0 |
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8 |
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1.23 |
1.23 |
23.6 |
-1.93 |
-0.47 |
20.9 |
74 |
3 |
1 |
2 |
1 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program