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PDBsum entry 3vs5
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Pore analysis for: 3vs5 calculated with  MOLE 2.0
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PDB id
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3vs5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.34 |
4.65 |
27.0 |
-2.36 |
-0.66 |
31.5 |
88 |
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3 |
5 |
5 |
2 |
0 |
0 |
0 |
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2 |
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1.92 |
2.14 |
34.8 |
-1.60 |
-0.69 |
15.4 |
84 |
2 |
5 |
3 |
1 |
0 |
2 |
0 |
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3 |
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2.24 |
2.99 |
35.8 |
-1.53 |
-0.47 |
12.6 |
82 |
2 |
4 |
3 |
3 |
1 |
2 |
0 |
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4 |
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2.11 |
2.42 |
37.2 |
-1.58 |
-0.44 |
20.5 |
84 |
6 |
7 |
5 |
2 |
2 |
0 |
0 |
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5 |
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1.99 |
2.21 |
87.1 |
-1.35 |
-0.50 |
10.8 |
80 |
6 |
4 |
7 |
3 |
1 |
5 |
0 |
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6 |
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1.38 |
1.39 |
87.1 |
-0.06 |
-0.05 |
13.9 |
85 |
4 |
4 |
7 |
15 |
3 |
1 |
0 |
VSG 601 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program