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PDBsum entry 3vrb
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Pore analysis for: 3vrb calculated with  MOLE 2.0
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PDB id
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3vrb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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16 pores,
coloured by radius
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16 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
1.38 |
25.2 |
2.11 |
0.94 |
5.3 |
76 |
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2 |
0 |
0 |
6 |
3 |
0 |
0 |
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2 |
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2.22 |
3.92 |
37.5 |
1.75 |
0.98 |
3.9 |
74 |
1 |
2 |
0 |
10 |
6 |
0 |
0 |
EPH 201 H
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3 |
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1.29 |
1.59 |
61.1 |
-0.83 |
0.04 |
18.2 |
81 |
7 |
3 |
5 |
5 |
5 |
1 |
0 |
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4 |
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1.45 |
2.70 |
75.9 |
-0.91 |
-0.08 |
14.5 |
78 |
5 |
5 |
5 |
8 |
6 |
2 |
0 |
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5 |
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1.28 |
2.86 |
79.3 |
-1.37 |
-0.19 |
24.7 |
79 |
7 |
3 |
1 |
5 |
2 |
2 |
0 |
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6 |
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1.27 |
2.99 |
84.9 |
-0.66 |
0.14 |
19.4 |
81 |
13 |
3 |
2 |
12 |
4 |
2 |
0 |
HEM 201 C EPH 201 D
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7 |
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1.44 |
3.98 |
93.0 |
-0.59 |
0.21 |
19.9 |
77 |
14 |
2 |
1 |
12 |
8 |
1 |
0 |
HEM 201 G EPH 201 H
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8 |
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1.43 |
3.01 |
93.2 |
-0.73 |
0.25 |
20.2 |
76 |
15 |
4 |
1 |
11 |
7 |
1 |
0 |
HEM 201 G EPH 201 H
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9 |
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1.25 |
2.93 |
94.2 |
-0.55 |
0.29 |
20.6 |
79 |
13 |
3 |
2 |
12 |
6 |
2 |
0 |
HEM 201 C EPH 201 D
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10 |
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1.43 |
2.98 |
101.6 |
-1.28 |
-0.02 |
23.2 |
72 |
8 |
4 |
0 |
6 |
6 |
2 |
0 |
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11 |
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1.89 |
3.17 |
111.0 |
-0.61 |
0.08 |
18.2 |
80 |
13 |
3 |
1 |
11 |
4 |
2 |
0 |
HEM 201 C EPH 201 D
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12 |
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2.24 |
2.36 |
110.4 |
-2.06 |
-0.32 |
30.8 |
78 |
16 |
9 |
3 |
6 |
2 |
1 |
0 |
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13 |
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2.03 |
2.27 |
120.3 |
-0.41 |
0.25 |
18.8 |
78 |
13 |
3 |
1 |
11 |
6 |
2 |
0 |
HEM 201 C EPH 201 D
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14 |
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1.51 |
4.04 |
136.1 |
-0.47 |
0.14 |
18.3 |
80 |
12 |
4 |
1 |
14 |
8 |
1 |
0 |
HEM 201 G EPH 201 H
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15 |
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1.43 |
2.93 |
146.5 |
-1.36 |
-0.11 |
25.0 |
75 |
15 |
7 |
3 |
9 |
6 |
2 |
0 |
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16 |
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2.03 |
2.03 |
181.0 |
-0.80 |
0.02 |
21.1 |
80 |
19 |
7 |
3 |
17 |
8 |
1 |
0 |
HEM 201 G EPH 201 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program