PDBsum entry 3vqk Go to PDB code:  Pore analysis for: 3vqk calculated with MOLE 2.0 PDB id 3vqk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.29 29.9 2.12 0.64 1.2 85 0 0 1 12 1 1 0   2 1.18 1.18 30.1 1.63 0.51 2.8 85 1 0 1 12 1 1 0   3 1.24 1.29 33.7 1.92 0.61 1.2 82 0 0 1 11 2 1 0   4 2.03 2.18 37.9 1.53 0.81 7.8 67 2 0 0 5 5 0 0   5 1.10 1.09 39.1 2.07 0.74 2.2 82 1 0 1 11 2 1 0   6 1.19 1.19 39.5 0.07 -0.15 7.3 87 3 1 2 5 2 1 0   7 1.10 1.10 43.4 0.28 -0.08 6.5 89 2 1 2 7 2 1 0   8 2.09 3.28 56.1 -0.69 -0.47 9.6 90 3 1 5 8 2 0 0   9 1.16 1.17 76.5 -1.19 -0.46 14.1 87 4 2 4 7 2 1 0   10 1.21 1.20 76.9 -0.60 -0.34 10.7 89 3 3 5 9 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.