PDBsum entry 3vmf Go to PDB code:  Pore analysis for: 3vmf calculated with MOLE 2.0 PDB id 3vmf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.59 1.82 29.4 -1.95 -0.49 17.3 67 2 1 2 1 0 5 0   2 1.49 2.30 32.0 -1.70 -0.60 21.4 83 2 3 2 2 0 2 0   3 1.59 1.65 34.1 0.24 0.01 17.8 82 3 5 1 7 1 0 0   4 2.93 3.26 38.9 -1.26 -0.29 27.6 87 5 4 1 5 0 0 0   5 1.44 2.18 43.6 -0.12 0.26 17.2 77 6 1 1 5 4 0 0   6 1.61 1.61 45.2 -1.78 -0.60 19.8 84 5 4 4 3 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.