PDBsum entry 3vkf Go to PDB code:  Pore analysis for: 3vkf calculated with MOLE 2.0 PDB id 3vkf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 1.39 30.3 -1.97 -0.66 14.5 84 2 2 4 1 0 2 0   2 1.49 1.62 47.2 -1.89 -0.44 24.7 74 3 5 1 1 3 1 0   3 1.47 4.47 150.3 -1.91 -0.45 30.7 80 9 10 0 3 2 1 0   4 1.42 4.47 215.3 -2.20 -0.42 31.3 79 10 14 3 5 3 2 0   5 1.24 1.55 324.5 -1.68 -0.39 21.2 82 12 13 13 11 3 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.