PDBsum entry 3vjk Go to PDB code:  Pore analysis for: 3vjk calculated with MOLE 2.0 PDB id 3vjk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.83 2.72 30.5 -1.99 -0.01 22.1 75 5 1 3 3 4 0 0   2 4.01 4.19 42.6 -1.54 -0.27 19.9 79 6 3 5 4 3 2 0   3 1.36 2.70 54.8 -1.62 -0.66 13.8 90 5 2 4 1 0 0 0   4 1.81 1.92 63.7 -1.34 -0.10 18.6 72 7 2 4 4 7 0 0   5 1.86 2.75 121.5 -1.54 -0.28 20.0 80 11 6 10 8 7 2 0  NAG 1 C 6 1.74 3.49 30.2 -1.86 -0.09 22.8 71 4 1 2 1 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.