PDBsum entry 3vjc Go to PDB code:  Pore analysis for: 3vjc calculated with MOLE 2.0 PDB id 3vjc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.22 3.28 31.8 -2.31 -0.57 27.4 81 4 6 3 0 1 2 0   2 3.19 3.35 37.3 -2.34 -0.42 28.7 81 4 4 3 0 2 1 0   3 3.42 3.57 37.6 -2.47 -0.52 29.1 79 4 5 2 0 2 1 0   4 2.69 2.85 42.6 -2.77 -0.59 31.1 84 4 4 4 0 1 2 0   5 2.68 2.85 43.1 -2.10 -0.41 26.7 78 4 5 3 0 3 2 0   6 1.61 1.64 103.9 -2.19 -0.54 23.4 82 9 9 8 2 3 2 0   7 1.59 2.35 109.2 -1.98 -0.47 21.5 80 8 8 8 2 4 2 0   8 2.34 2.90 81.3 -1.11 -0.09 24.0 79 10 7 4 9 4 0 0  ZGA 400 B 9 1.15 1.14 100.1 -2.12 -0.35 28.9 76 11 7 5 3 4 0 0  ZGA 400 C 10 1.21 1.22 145.2 -1.32 -0.16 24.4 78 15 14 8 10 8 0 0  ZGA 400 B ZGA 400 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.