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PDBsum entry 3vev

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Tunnel analysis for: 3vev calculated with MOLE 2.0 PDB id
3vev
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.23 18.9 -2.26 -0.77 18.1 85 2 3 5 1 0 1 0  GLC 501 A
2 1.20 1.21 21.3 -2.09 -0.68 19.2 85 2 4 4 2 0 1 0  GLC 501 A
3 1.79 1.84 21.9 -0.93 -0.37 19.7 89 3 3 2 2 0 0 0  GLC 501 A
4 1.84 1.88 24.7 -1.38 -0.49 21.1 87 3 4 3 2 0 0 0  GLC 501 A
5 1.57 1.57 15.1 0.13 0.40 5.9 84 1 1 1 6 1 1 0  0H4 502 A
6 1.58 1.57 18.9 1.24 0.46 5.3 84 2 0 0 6 1 1 0  0H4 502 A
7 1.30 1.68 15.6 -1.82 -0.65 18.9 93 2 2 2 1 0 0 0  
8 1.25 1.41 17.5 -1.70 -0.59 20.4 90 2 1 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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