PDBsum entry 3vcc Go to PDB code:  Tunnel analysis for: 3vcc calculated with MOLE 2.0 PDB id 3vcc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.33 25.6 1.62 0.59 7.5 69 1 1 0 8 2 0 0   2 1.43 1.59 17.8 -2.53 -0.50 30.1 86 2 3 2 2 1 0 0   3 1.22 1.73 26.8 0.61 0.21 12.0 77 2 2 1 8 1 0 0   4 1.22 1.69 29.5 0.82 0.33 10.5 74 2 2 1 8 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.