PDBsum entry 3vcb Go to PDB code:  Tunnel analysis for: 3vcb calculated with MOLE 2.0 PDB id 3vcb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 1.88 16.5 -0.80 -0.02 6.6 79 1 0 0 2 2 1 0   2 1.81 1.88 16.9 -1.54 -0.11 24.7 78 2 3 0 3 2 0 0   3 1.46 1.59 18.9 0.36 0.16 2.9 89 0 1 0 3 2 0 0   4 1.81 1.88 19.9 -1.39 -0.10 23.2 78 2 3 0 3 2 0 0   5 1.82 1.89 20.7 -1.27 -0.28 10.2 82 2 1 1 2 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.