PDBsum entry 3vbg Go to PDB code:  Pore analysis for: 3vbg calculated with MOLE 2.0 PDB id 3vbg Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.78 29.7 -0.62 0.21 10.7 79 4 1 2 6 3 0 0  03M 1 A 03M 1 B 2 2.73 4.28 30.3 -0.01 0.33 7.3 81 4 1 2 8 2 0 0  03M 1 A 03M 1 B 3 1.67 1.77 33.5 -0.38 0.19 8.1 78 3 0 2 6 3 0 0  03M 1 A 03M 1 B 4 2.88 4.19 28.4 -0.11 0.39 9.7 81 5 1 2 8 2 0 0  03M 1 C 03M 1 D 5 1.38 2.29 28.9 1.75 0.90 10.6 76 4 2 0 7 3 0 0  03M 1 C 6 1.75 1.96 36.7 -0.06 0.32 7.9 80 4 1 2 8 3 0 0  03M 1 C 03M 1 D 7 1.37 2.26 37.2 1.25 0.66 8.4 77 3 1 0 8 4 0 0  03M 1 C 8 1.38 2.28 42.4 0.87 0.58 6.3 78 3 1 2 12 4 0 0  03M 1 C 03M 1 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.