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PDBsum entry 3vb3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3vb3 calculated with MOLE 2.0 PDB id
3vb3
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.90 2.90 52.4 -1.49 -0.44 23.4 91 5 5 4 3 1 0 0  
2 2.78 3.29 67.2 -1.50 -0.54 21.2 87 6 4 3 3 1 0 0  PEG 401 A
3 1.13 2.62 33.6 -1.01 -0.27 10.5 84 1 2 7 3 3 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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