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PDBsum entry 3v8u
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Pore analysis for: 3v8u calculated with  MOLE 2.0
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PDB id
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3v8u
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.62 |
1.62 |
30.3 |
-1.85 |
-0.54 |
23.4 |
87 |
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2 |
2 |
2 |
1 |
0 |
0 |
0 |
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2 |
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3.31 |
4.68 |
51.3 |
-2.33 |
-0.54 |
23.3 |
79 |
6 |
6 |
5 |
2 |
1 |
2 |
0 |
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3 |
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1.21 |
1.38 |
57.5 |
-1.96 |
-0.60 |
24.1 |
82 |
7 |
5 |
3 |
4 |
1 |
0 |
0 |
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4 |
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2.62 |
2.85 |
77.8 |
-2.58 |
-0.51 |
22.0 |
77 |
8 |
5 |
4 |
1 |
2 |
2 |
0 |
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5 |
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2.22 |
2.88 |
87.3 |
-2.24 |
-0.62 |
18.8 |
87 |
7 |
4 |
13 |
2 |
1 |
0 |
0 |
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6 |
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2.25 |
2.91 |
87.7 |
-2.39 |
-0.60 |
21.0 |
84 |
7 |
7 |
10 |
1 |
2 |
1 |
0 |
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7 |
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2.27 |
2.92 |
97.5 |
-2.44 |
-0.64 |
16.7 |
83 |
8 |
4 |
10 |
1 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program