PDBsum entry 3v7d Go to PDB code:  Pore analysis for: 3v7d calculated with MOLE 2.0 PDB id 3v7d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.52 4.70 27.7 -2.89 -0.65 35.7 88 7 4 3 0 0 0 0   2 1.45 2.48 89.0 -2.12 -0.39 28.9 78 9 6 5 3 3 0 0   3 1.16 1.29 95.2 -2.66 -0.57 32.9 80 10 7 4 2 1 0 0   4 1.17 1.29 95.6 -2.73 -0.54 33.0 80 8 8 5 2 1 0 0   5 3.17 3.51 28.8 -1.45 -0.20 21.5 76 6 2 2 3 2 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.