PDBsum entry 3v4y Go to PDB code:  Pore analysis for: 3v4y calculated with MOLE 2.0 PDB id 3v4y Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.96 2.88 35.5 -2.41 -0.56 23.2 83 5 2 3 0 1 1 0   2 1.91 1.98 37.4 -2.17 -0.60 31.4 86 6 6 1 2 1 0 0   3 3.66 4.38 40.8 -2.09 -0.64 28.4 79 7 7 3 2 0 1 0   4 3.15 3.14 42.6 -2.42 -0.59 32.5 80 8 7 3 2 0 1 0   5 1.38 1.43 43.7 -1.77 -0.29 28.7 79 7 3 0 5 1 1 0   6 2.00 2.17 47.2 -2.16 -0.59 33.2 87 4 6 1 3 0 0 0   7 1.61 1.87 50.9 -1.27 -0.24 24.3 78 8 5 2 7 0 0 0   8 1.62 1.87 72.0 -2.31 -0.47 30.9 81 10 8 2 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.