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PDBsum entry 3v0g

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3v0g calculated with MOLE 2.0 PDB id
3v0g
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 1.32 21.7 -1.33 -0.04 18.7 77 4 2 1 1 2 0 0  
2 1.23 1.49 17.5 0.78 0.50 13.1 69 2 2 0 4 3 0 0  
3 1.33 1.47 18.0 0.84 0.57 13.3 74 2 2 0 4 3 0 0  
4 1.39 2.32 16.7 -0.08 0.12 20.5 70 3 2 0 2 3 0 0  
5 1.37 2.31 20.8 -0.25 0.23 20.4 65 2 2 0 3 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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