PDBsum entry 3v0d Go to PDB code:  Pore analysis for: 3v0d calculated with MOLE 2.0 PDB id 3v0d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.15 2.61 26.0 -1.98 -0.82 21.8 86 4 3 2 0 0 0 0   2 1.22 4.32 43.7 -2.38 -0.31 29.5 74 5 4 1 1 2 0 0   3 1.15 4.21 57.4 -2.71 -0.54 33.6 81 7 3 2 0 2 0 0   4 1.68 2.26 38.8 -2.13 -0.35 27.4 79 6 3 1 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.