 |
PDBsum entry 3uyt
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3uyt calculated with MOLE 2.0
|
PDB id
|
|
|
|
3uyt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 pores,
coloured by radius |
 |
5 pores,
coloured by radius
|
5 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.83 |
1.99 |
34.0 |
0.02 |
-0.22 |
10.1 |
83 |
 |
2 |
2 |
3 |
5 |
0 |
1 |
0 |
 |
0CK 295 B
|
 |
 |
2 |
 |
1.82 |
2.27 |
40.3 |
-2.03 |
-0.55 |
21.8 |
82 |
4 |
3 |
4 |
1 |
3 |
1 |
0 |
|
 |
3 |
 |
1.06 |
1.44 |
67.6 |
-0.81 |
-0.04 |
13.6 |
80 |
5 |
5 |
4 |
6 |
4 |
2 |
0 |
|
 |
4 |
 |
1.22 |
1.44 |
71.1 |
-1.03 |
-0.36 |
16.7 |
86 |
7 |
4 |
8 |
9 |
0 |
1 |
0 |
0CK 295 B
|
 |
5 |
 |
1.19 |
1.68 |
97.5 |
-1.06 |
-0.24 |
16.2 |
84 |
7 |
7 |
10 |
10 |
4 |
1 |
0 |
0CK 295 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |