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PDBsum entry 3utf

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3utf calculated with MOLE 2.0 PDB id
3utf
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.13 2.13 40.3 -1.14 -0.18 13.7 79 6 0 6 3 4 1 0  FDA 511 B
2 1.84 1.94 45.7 -1.10 -0.16 10.6 75 5 2 5 3 5 2 0  FDA 511 A
3 2.09 2.15 83.2 -0.84 -0.12 12.7 79 9 0 9 6 7 2 0  FDA 511 D SO4 516 D
4 1.36 1.67 88.0 -1.70 -0.34 14.2 76 7 5 8 3 8 3 0  FDA 511 D SO4 516 D
5 1.45 2.80 88.7 -0.26 -0.14 9.9 85 3 2 6 15 1 2 0  
6 1.83 1.90 96.3 -1.08 -0.18 14.4 80 8 2 8 7 6 3 0  FDA 511 D SO4 516 D
7 1.36 2.02 99.1 -0.65 -0.08 11.0 81 8 1 10 14 6 2 0  FDA 511 C SO4 514 C SO4 517 C
8 1.44 1.70 98.7 -1.22 -0.42 12.1 85 5 5 10 5 2 3 0  SO4 516 D
9 1.41 1.65 111.3 -1.55 -0.50 14.2 85 4 7 9 6 2 4 0  SO4 516 D
10 1.42 2.82 132.6 -0.84 -0.16 12.0 80 9 2 13 17 8 4 0  FDA 511 D SO4 516 D
11 1.56 1.71 140.4 -1.18 -0.26 12.9 83 10 3 15 10 7 4 0  FDA 511 C SO4 514 C SO4 517 C
12 1.42 2.86 147.6 -1.04 -0.36 11.5 84 5 7 13 16 3 5 0  SO4 516 D
13 1.43 2.85 183.2 -0.70 -0.11 11.4 82 16 1 19 23 12 4 0  FDA 511 C SO4 514 C SO4 517 C FDA 511 D SO4 516 D
14 1.47 1.80 198.6 -0.90 -0.26 11.1 84 12 6 19 22 7 5 0  FDA 511 C SO4 514 C SO4 517 C SO4 516 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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